STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_0291537S ribosomal protein S12, mitochondrial. (185 aa)    
Predicted Functional Partners:
TCAP_06983
Ribosomal protein S16.
   
 0.999
TCAP_06295
37S ribosomal protein MRP2, mitochondrial.
  
 0.999
TCAP_06171
37S ribosomal protein S10, mitochondrial.
  
 0.999
TCAP_05897
37S ribosomal protein Mrp17.
  
 0.999
TCAP_05789
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
TCAP_04355
Uncharacterized protein.
   
 0.999
TCAP_04308
37S ribosomal protein S18, mitochondrial.
  
 0.999
TCAP_03743
Meiotically up-regulated protein.
  
 0.999
TCAP_02389
37S ribosomal protein S7, mitochondrial.
  
 0.999
TCAP_06742
54S ribosomal protein yml6, mitochondrial.
  
 0.998
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.