STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_02708Uncharacterized protein. (488 aa)    
Predicted Functional Partners:
TCAP_02796
Cullin-3; Belongs to the cullin family.
   
 0.921
TCAP_01363
Cullin-1; Belongs to the cullin family.
   
 0.921
TCAP_03692
SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.872
TCAP_03401
ATPase Rpt6 of the 19S regulatory particle of the 26S proteasome; Belongs to the AAA ATPase family.
   
  0.750
TCAP_02656
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
  0.750
TCAP_07079
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
  0.747
TCAP_04157
RING-box protein 1.
    
 0.747
TCAP_04210
Ubiquitin.
    
 0.699
TCAP_04418
DNA repair protein crb2.
    
   0.687
TCAP_03119
Tat-binding-like protein 7.
   
  0.667
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.