STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_02557Membrane protein. (505 aa)    
Predicted Functional Partners:
TCAP_06175
Histone domain-containing protein.
   
 0.804
TCAP_00636
Histone H3; Belongs to the histone H3 family.
   
 0.804
TCAP_06086
Polycomb protein esc.
    
 0.795
TCAP_02417
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.785
TCAP_06451
BAH domain-containing protein.
    
 
 0.773
TCAP_06074
RNA polymerase I-specific transcription initiation factor rrn7.
    
  0.762
TCAP_07398
Chromo domain-containing protein.
    
 0.758
TCAP_05564
Uncharacterized protein.
    
 0.758
TCAP_04770
Chromo domain-containing protein.
    
 0.758
TCAP_02704
Histone acetyltransferase type B subunit 2.
    
 0.758
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.