STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_02038Uncharacterized protein. (1494 aa)    
Predicted Functional Partners:
TCAP_03658
Uncharacterized protein.
   
 0.907
TCAP_04850
Glycerophosphodiester phosphodiesterase.
   
 0.814
TCAP_02109
Ankyrin repeat protein nuc-2.
   
 0.812
TCAP_04703
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.736
TCAP_00550
Proteasome subunit beta.
 
      0.710
TCAP_02002
Septation protein imp2.
    
 0.663
TCAP_00722
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.662
TCAP_01641
Ubiquitin-like-specific protease 1.
    
  0.652
TCAP_00892
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 
 0.639
TCAP_05312
Actin cytoskeleton-regulatory complex protein.
   
 0.636
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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