STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_01289Uncharacterized protein. (151 aa)    
Predicted Functional Partners:
TCAP_06257
Uncharacterized protein.
 
     0.940
TCAP_04358
Anaphase-promoting complex subunit 10.
    
 0.730
TCAP_02109
Ankyrin repeat protein nuc-2.
    
 0.704
TCAP_06995
Stress gene activator.
    
 0.685
TCAP_06092
Cutinase transcription factor 1 alpha.
    
 0.685
TCAP_00660
Cutinase transcription factor 1 beta.
    
 0.685
TCAP_06679
Transcription initiation factor TFIID subunit 5.
    
 0.639
TCAP_06417
Polyadenylation factor subunit 2.
    
 0.639
TCAP_04568
Meiosis-specific APC/C activator protein AMA1.
    
 0.639
TCAP_03650
ASTRA-associated protein 1.
    
 0.639
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.