STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_01281Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
TCAP_04429
Dynactin subunit 4.
    
 0.998
TCAP_04125
Dynactin subunit 5.
   
 0.998
TCAP_03663
Uncharacterized protein.
   
 0.993
TCAP_03178
Dynactin subunit 2.
    
 0.991
TCAP_03414
Dynactin.
    
 0.983
TCAP_06452
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.967
TCAP_05098
Actin.
    
 0.926
TCAP_01958
Actin-like protein; Belongs to the actin family.
    
 0.926
TCAP_06577
Cytoplasmic dynein 1 light intermediate chain 2.
    
 0.908
TCAP_02397
Cytoplasmic dynein 1 intermediate chain 2.
    
 0.885
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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