STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_01040TauD domain-containing protein. (432 aa)    
Predicted Functional Partners:
TCAP_06082
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.824
TCAP_00970
3-hydroxybutyryl-CoA dehydrogenase.
     
 0.675
TCAP_06072
Rhodanese domain protein.
     
 0.618
TCAP_03863
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.607
TCAP_03597
Trimethyllysine dioxygenase.
     
 0.604
TCAP_05360
Asparagine-tRNA ligase, cytoplasmic; Belongs to the arginase family.
   
 
  0.591
TCAP_05814
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
    
 0.580
TCAP_05084
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.575
TCAP_05886
Dihydroxy-acid dehydratase, mitochondrial.
     
 0.562
TCAP_04936
Acetolactate synthase.
  
 
 0.562
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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