STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_01052ATP-dependent RNA helicase suv3, mitochondrial. (1151 aa)    
Predicted Functional Partners:
TCAP_06127
Mitochondrial protein cyt-4.
   
 
 0.948
TCAP_04744
Virulence protein SSD1.
   
 
 0.821
TCAP_00767
Exosome complex exonuclease dis3; Belongs to the RNR ribonuclease family.
   
 
 0.821
TCAP_06815
Ribonuclease Z 1.
   
  
 0.753
TCAP_04751
mRNA degradation protein, mitochondrial.
    
 
 0.611
TCAP_06351
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 
 0.547
TCAP_05223
Vacuolar protein sorting-associated protein 26.
 
   
 0.515
TCAP_04162
25S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family.
   
 
 0.510
TCAP_02366
Gluconolactonase.
   
 
 0.510
TCAP_00966
Heterokaryon incompatibility.
   
 
 0.510
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.