STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_00870Uncharacterized protein. (480 aa)    
Predicted Functional Partners:
TCAP_04826
Integral membrane protein sed5.
    
 0.965
TCAP_05069
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.963
TCAP_05036
Synaptobrevin ykt6; Belongs to the synaptobrevin family.
    
 0.963
TCAP_01575
Uncharacterized protein.
    
 0.957
TCAP_01944
Protein transport protein sec22; Belongs to the synaptobrevin family.
   
 0.947
TCAP_04598
Protein transport protein sft1.
   
 0.921
TCAP_02500
t-SNARE coiled-coil homology domain-containing protein.
   
 0.921
TCAP_03964
Vesicular-fusion protein sec18.
   
 0.920
TCAP_04095
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 
 0.908
TCAP_02205
Protein transport protein SEC9.
    
 0.812
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.