STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_00841SNF7 family protein. (250 aa)    
Predicted Functional Partners:
TCAP_07226
Vacuolar-sorting protein SNF7.
    
0.997
TCAP_05593
Vacuolar protein-sorting-associated protein 25.
   
 0.996
TCAP_02610
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
    
 0.994
TCAP_05915
Vacuolar protein sorting-associated protein 24.
    
 0.992
TCAP_01513
ESCRT-III component.
   
 0.992
TCAP_03353
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
    
 0.982
TCAP_04781
Vacuolar protein-sorting-associated protein 36.
 
  
 0.981
TCAP_06564
Uncharacterized protein.
    
0.975
TCAP_03508
Vacuolar protein-sorting-associated protein 46.
   
 0.928
TCAP_00021
Charged multivesicular body protein 5.
   
 0.923
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.