STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_00824Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
TCAP_01564
Cytochrome c oxidase polypeptide VIb.
   
 0.730
TCAP_00518
Uncharacterized protein.
   
 0.716
TCAP_03987
Cytochrome c oxidase subunit 6, mitochondrial.
   
 0.698
TCAP_06878
Cytochrome c oxidase polypeptide 5, mitochondrial.
   
 0.686
TCAP_06658
Uncharacterized protein.
   
 0.685
TCAP_05891
Cytochrome c oxidase subunit 4, mitochondrial.
   
 0.685
TCAP_07064
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.682
TCAP_04501
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.682
TCAP_00853
Cytochrome c oxidase subunit 6B-like protein.
   
  0.650
TCAP_02907
Uncharacterized protein.
   
  0.595
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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