STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_00748Serine/threonine-protein kinase apg-1. (985 aa)    
Predicted Functional Partners:
TCAP_03633
Vacuolar protein sorting-associated protein atg6.
    
 0.997
TCAP_05310
DUF1649 domain protein.
    
 0.995
TCAP_00645
Nitrogen assimilation transcription factor nit-4.
   
 0.995
TCAP_04917
Autophagy-like protein 2.
   
 0.994
TCAP_00494
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.994
TCAP_04885
Phosphatidylinositol 3-kinase tor2; Belongs to the PI3/PI4-kinase family.
    
 0.993
TCAP_04636
Serine/threonine-protein kinase VPS15.
    
 0.989
TCAP_03550
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.989
TCAP_06691
Autophagy-like protein 11.
    
 0.988
TCAP_01322
Autophagy protein 16.
    
 
 0.977
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.