STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_00607Oxidoreductase. (251 aa)    
Predicted Functional Partners:
TCAP_00865
Uncharacterized protein YmaE.
   
 0.703
TCAP_07408
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Belongs to the metallo-dependent hydrolases superfamily.
 
 
 
  0.667
TCAP_01206
Thymidylate synthase.
     
 0.658
TCAP_00256
Lactoylglutathione lyase.
   
 
 0.654
TCAP_06683
HATPase_c domain-containing protein.
    
 0.653
TCAP_06682
Flavin reductase-like, FMN-binding protein.
    
 0.653
TCAP_01458
Tuberous sclerosis 1 protein.
    
 0.653
TCAP_06976
Dihydrofolate reductase.
   
 
 0.646
TCAP_06834
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.646
TCAP_03992
Homocysteine S-methyltransferase 1.
 
    
 0.642
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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