STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_00598Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (326 aa)    
Predicted Functional Partners:
TCAP_07107
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.933
TCAP_06786
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
0.904
TCAP_01329
Ubiquitin-conjugating enzyme E2 6.
 
      0.899
TCAP_04076
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.884
TCAP_04878
Uncharacterized protein.
 
      0.676
TCAP_04894
Golgi membrane protein.
 
    
 0.640
TCAP_07077
Cytochrome c1, heme protein, mitochondrial.
   
 
 0.617
TCAP_04658
Uncharacterized protein.
   
  
 0.539
TCAP_02348
Vacuolar amino acid transporter 3.
    
 
 0.529
TCAP_06712
Electron transfer protein 1, mitochondrial.
 
  
 
 0.510
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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