STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_00249Uncharacterized protein. (1825 aa)    
Predicted Functional Partners:
TCAP_03000
Separin.
   
 
 0.821
TCAP_05606
Checkpoint serine/threonine-protein kinase bub1.
   
 
 0.730
TCAP_04568
Meiosis-specific APC/C activator protein AMA1.
   
 
 0.682
TCAP_03622
WD_REPEATS_REGION domain-containing protein.
   
 
 0.682
TCAP_00347
Fizzy-like protein.
   
 
 0.682
TCAP_03849
Cell cycle serine/threonine-protein kinase CDC5/MSD2.
   
 
 0.651
TCAP_01376
Kinesin-like protein bimC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.648
TCAP_02095
HORMA domain-containing protein.
   
 
 0.645
TCAP_05302
Kinetochore protein NDC80.
   
  
 0.612
TCAP_05130
Mitotic checkpoint protein.
     
 0.601
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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