STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW19351.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
SDW19381.1
Hypothetical protein.
       0.773
SDW19415.1
Hypothetical protein.
       0.773
SDW19450.1
Hypothetical protein.
       0.701
SDW19488.1
Hypothetical protein.
       0.701
SDW19311.1
Protein of unknown function.
       0.661
SDW19517.1
Hypothetical protein.
       0.443
SDW19560.1
Hypothetical protein.
       0.406
Your Current Organism:
Capnocytophaga granulosa
NCBI taxonomy Id: 45242
Other names: ATCC 51502, C. granulosa, CCUG 32991, CIP 104128, DSM 11449, JCM 8566, LMG 16022, LMG:16022, NCTC 12948, strain B0611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.