STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW42620.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
SDW42662.1
Antibiotic biosynthesis monooxygenase.
       0.581
SDW42587.1
DNA-3-methyladenine glycosylase III.
       0.553
SDW42693.1
Hypothetical protein.
       0.520
SDW42730.1
Hypothetical protein.
       0.520
potA
Osmoprotectant transport system ATP-binding protein.
       0.488
opuCC
Osmoprotectant transport system permease protein.
       0.488
SDW42475.1
Hypothetical protein.
       0.485
Your Current Organism:
Capnocytophaga granulosa
NCBI taxonomy Id: 45242
Other names: ATCC 51502, C. granulosa, CCUG 32991, CIP 104128, DSM 11449, JCM 8566, LMG 16022, LMG:16022, NCTC 12948, strain B0611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.