STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNphospholipid/cholesterol/gamma-HCH transport system ATP-binding protein. (254 aa)    
Predicted Functional Partners:
mlaE
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.999
SDW46762.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.997
ybhF_3
Protein involved in gliding motility GldA.
  
 
0.856
macB_3
Putative ABC transport system permease protein.
 
      0.813
lptB_2
Lipopolysaccharide export system ATP-binding protein.
 
 
 
0.706
fbpC
ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components.
  
 
 
0.694
ftsH_2
ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.
  
     0.674
ybhR_1
ABC-2 type transport system permease protein.
    
  0.606
ybhR_2
ABC-2 type transport system permease protein.
    
  0.606
ybhR_5
ABC-2 type transport system permease protein.
    
  0.606
Your Current Organism:
Capnocytophaga granulosa
NCBI taxonomy Id: 45242
Other names: ATCC 51502, C. granulosa, CCUG 32991, CIP 104128, DSM 11449, JCM 8566, LMG 16022, LMG:16022, NCTC 12948, strain B0611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.