STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fsrMFS transporter, FSR family, fosmidomycin resistance protein. (408 aa)    
Predicted Functional Partners:
SDW49953.1
HlyD family secretion protein.
   
  0.700
SDW97912.1
HlyD family secretion protein.
   
  0.700
SDX09357.1
Hypothetical protein.
       0.533
bepE
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
  0.511
mdtC
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
  0.511
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.460
thrA_1
Aspartate kinase.
   
  0.407
metX
Homoserine O-acetyltransferase; Belongs to the AB hydrolase superfamily. MetX family.
   
  0.407
Your Current Organism:
Capnocytophaga granulosa
NCBI taxonomy Id: 45242
Other names: ATCC 51502, C. granulosa, CCUG 32991, CIP 104128, DSM 11449, JCM 8566, LMG 16022, LMG:16022, NCTC 12948, strain B0611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.