Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMD84185.1ZIP family metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
AMD85501.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
AMD84591.1
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
  
     0.610
AMD85356.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.607
AMD84502.1
Cell division protein ZapA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
AMD84186.1
Four helix bundle protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
AMD84184.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.557
AMD84187.1
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.557
AMD84188.1
Phenol degradation protein meta; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
AMD85096.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.511
AMD84183.1
Ferrous iron transporter B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.510
Your Current Organism:
Capnocytophaga haemolytica
NCBI taxonomy Id: 45243
Other names: ATCC 51501, C. haemolytica, CCUG 32990, CIP 104125, DSM 11385, JCM 8565, LMG 16021, LMG:16021, NCTC 12947, strain A0404
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