Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMD84836.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)    
Predicted Functional Partners:
AMD86199.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.900
AMD84726.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
AMD85988.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.786
AMD84722.1
Dialkylrecorsinol condensing enzyme DarA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.783
AMD84723.1
3-oxoacyl-ACP synthase; FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
AMD84725.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.759
AMD84720.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.740
AMD86193.1
3-hydroxyacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
AMD84788.1
Cell envelope biogenesis protein LolA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.735
AMD84396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.726
Your Current Organism:
Capnocytophaga haemolytica
NCBI taxonomy Id: 45243
Other names: ATCC 51501, C. haemolytica, CCUG 32990, CIP 104125, DSM 11385, JCM 8565, LMG 16021, LMG:16021, NCTC 12947, strain A0404
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