STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMD85617.1Clp protease ClpS; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpS family. (95 aa)    
Predicted Functional Partners:
AMD85616.1
Ribosomal protein L11 methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.845
AMD86044.1
DNA starvation/stationary phase protection protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
   
 
 0.821
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.725
AMD85738.1
Clp protease ClpC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.
  
 
 0.725
AMD85011.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.718
AMD84502.1
Cell division protein ZapA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.701
AMD85173.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
AMD84927.1
acyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.553
AMD84595.1
Gliding motility lipoprotein GldD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
AMD85516.1
RNA polymerase subunit sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.547
Your Current Organism:
Capnocytophaga haemolytica
NCBI taxonomy Id: 45243
Other names: ATCC 51501, C. haemolytica, CCUG 32990, CIP 104125, DSM 11385, JCM 8565, LMG 16021, LMG:16021, NCTC 12947, strain A0404
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.