STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMD85992.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)    
Predicted Functional Partners:
AMD86283.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.869
AMD85991.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
AMD84854.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.747
AMD84703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.700
AMD85993.1
ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.686
AMD85990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.678
AMD86141.1
Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.672
AMD84404.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.665
AMD86265.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
AMD85172.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
Your Current Organism:
Capnocytophaga haemolytica
NCBI taxonomy Id: 45243
Other names: ATCC 51501, C. haemolytica, CCUG 32990, CIP 104125, DSM 11385, JCM 8565, LMG 16021, LMG:16021, NCTC 12947, strain A0404
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.