STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_0056Hypothetical protein. (270 aa)    
Predicted Functional Partners:
Aasi_0053
PRINTS: PR00395, Ribosomal protein S2; PROSITE: PS00963, Ribosomal protein S2; PANTHER: PTHR12534, Ribosomal protein S2, bacterial-type; PFAM: PF00318, Ribosomal protein S2; SUPERFAMILY: SSF52313, Ribosomal protein S2; TIGRFAMS: TIGR01011, Ribosomal protein S2, bacterial-type.
       0.613
Aasi_0054
Biopolymer transport protein ExbD/TolR; PROSITE: PS00360, Ribosomal protein S9; PANTHER: PTHR21569, Ribosomal protein S9; PFAM: PF00380, Ribosomal protein S9; PRODOM: PD001627, Ribosomal protein S9; GENE3D: G3DSA:3.30.230.10, Ribosomal protein S5 domain 2-type fold.
       0.613
Aasi_1464
Hypothetical protein; PROFILE: PS51178, PASTA; PFAM: PF03793, PASTA; SMART: SM00740, PASTA.
       0.613
Aasi_0057
Methyladenine glycosylase; PFAM: PF02472, Biopolymer transport protein ExbD/TolR.
       0.468
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.