STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_0368Hypothetical protein. (73 aa)    
Predicted Functional Partners:
Aasi_0305
Hypothetical protein; PROFILE: PS51192, Helicase, superfamily 1 and 2, ATP-binding;PS50151, UvrB/UvrC protein;PS51194, DNA/RNA helicase, C-terminal; SUPERFAMILY: SSF46600, UvrB, C-terminal UvrC-binding; PFAM: PF02151, UvrB/UvrC protein;PF04851, Restriction endonuclease, type I, R subunit/Type III, Res subunit;PF00271, DNA/RNA helicase, C-terminal; SMART: SM00487, DEAD-like helicase, N-terminal;SM00490, DNA/RNA helicase, C-terminal; TIGRFAMS: TIGR00631, Excinuclease ABC, B subunit.
  
     0.736
Aasi_0782
Hypothetical protein.
  
     0.693
Aasi_1645
Hypothetical protein.
  
     0.689
rplV
Hypothetical protein; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).
  
     0.682
Aasi_0216
Hypothetical protein; PFAM: PF00149, Metallophosphoesterase.
  
     0.654
Aasi_1499
Hypothetical protein; PROSITE: PS01166, RNA polymerase, beta subunit, conserved site; PANTHER: PTHR20856, DNA-directed RNA polymerase, subunit 2; PFAM: PF04560, RNA polymerase Rpb2, domain 7;PF00562, DNA-directed RNA polymerase, subunit 2, domain 6;PF04565, RNA polymerase Rpb2, domain 3;PF04563, RNA polymerase, beta subunit, protrusion;PF04561, RNA polymerase Rpb2, domain 2; TIGRFAMS: TIGR02013, DNA-directed RNA polymerase, beta subunit, bacterial-type.
  
     0.654
Aasi_0496
Hypothetical protein; PROSITE: PS00870, Chaperonin clpA/B; PROFILE: PS50151, UvrB/UvrC protein; PFAM: PF02151, UvrB/UvrC protein;PF00004, AAA ATPase, core;PF02861, Clp, N-terminal; SMART: SM00382, AAA+ ATPase, core.
  
     0.589
Aasi_0804
Hypothetical protein; PFAM: PF02684, Glycosyl transferase, family 19; TIGRFAMS: TIGR00215, Glycosyl transferase, family 19.
  
     0.530
Aasi_1844
Hypothetical protein.
  
     0.530
Aasi_0872
Hypothetical protein; PFAM: PF02517, Abortive infection protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
     0.484
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.