STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_0404Hypothetical protein; PFAM: PF05343, Peptidase M42; PIR: PIRSF001123, Peptidase M42. (374 aa)    
Predicted Functional Partners:
Aasi_0405
Hypothetical protein.
       0.527
Aasi_0406
Hypothetical protein; PANTHER: PTHR11431, Ferritin, N-terminal; PROFILE: PS50905, Ferritin-like; PFAM: PF00210, Ferritin and Dps; SUPERFAMILY: SSF47240, Ferritin/ribonucleotide reductase-like; PRODOM: PD000971, Ferritin, N-terminal; GENE3D: G3DSA:1.20.1260.10, Ferritin-related.
       0.527
Aasi_0403
Hypothetical protein; PROFILE: PS50089, Zinc finger, RING-type; PFAM: PF04564, U box; SMART: SM00504, U box; GENE3D: G3DSA:3.30.40.10, Zinc finger, RING/FYVE/PHD-type.
       0.492
Aasi_1577
Hypothetical protein.
       0.403
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.