STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_0428Hypothetical protein. (254 aa)    
Predicted Functional Partners:
Aasi_0427
Hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.
  
  
 0.928
Aasi_1098
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
  
  
 0.631
lpxK
Hypothetical protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
       0.583
Aasi_0074
Protein of unknown function DUF214; SUPERFAMILY: SSF52833, Thioredoxin-like fold; PFAM: PF00578, Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; GENE3D: G3DSA:3.40.30.10, Thioredoxin fold.
  
     0.540
Aasi_0782
Hypothetical protein.
  
     0.540
Aasi_0425
Hypothetical protein; SUPERFAMILY: SSF46689, Homeodomain-like.
       0.532
Aasi_0429
PANTHER: PTHR21368, Ribosomal protein L9; PROSITE: PS00651, Ribosomal protein L9; PFAM: PF01281, Ribosomal protein L9;PF03948, Ribosomal protein L9; SUPERFAMILY: SSF55653, Ribosomal protein L9;SSF55658, Ribosomal protein L9 N-terminal-like; GENE3D: G3DSA:3.10.430.100, Ribosomal protein L9;G3DSA:3.40.5.10, Ribosomal protein L9; TIGRFAMS: TIGR00158, Ribosomal protein L9.
 
     0.532
Aasi_0430
PRINTS: PR00974, Ribosomal protein S18; PANTHER: PTHR13479, Ribosomal protein S18; PROSITE: PS00057, Ribosomal protein S18; PFAM: PF01084, Ribosomal protein S18; SUPERFAMILY: SSF46911, Ribosomal protein S18; PRODOM: PD002239, Ribosomal protein S18; GENE3D: G3DSA:4.10.640.10, Ribosomal protein S18; TIGRFAMS: TIGR00165, Ribosomal protein S18; Belongs to the pseudouridine synthase RsuA family.
       0.429
asd
Hypothetical protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.420
Aasi_0014
RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.412
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.