STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_1196Hypothetical protein. (267 aa)    
Predicted Functional Partners:
Aasi_1195
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
 
   0.904
Aasi_0782
Hypothetical protein.
 
 
 0.882
Aasi_1648
Hypothetical protein.
 
 
 0.818
Aasi_1197
Hypothetical protein.
 
  
 0.766
Aasi_1325
Hypothetical protein; PFAM: PF01609, Transposase, IS4-like.
 
  
 0.750
lpxC
Hypothetical protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
     
 0.683
Aasi_1844
Hypothetical protein.
  
     0.619
Aasi_1962
Hypothetical protein.
     
 0.612
Aasi_0303
Hypothetical protein; PROSITE: PS00843, D-alanine--D-alanine ligase/VANA/B/C, conserved site; PROFILE: PS50975, ATP-grasp fold; PFAM: PF01820, D-alanine--D-alanine ligase, N-terminal;PF02222, ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; SUPERFAMILY: SSF52440, PreATP-grasp-like fold; GENE3D: G3DSA:3.30.1490.20, ATP-grasp fold, subdomain 1;G3DSA:3.40.50.20, Pre-ATP-grasp fold;G3DSA:3.30.470.20, ATP-grasp fold, subdomain 2; Belongs to the peptidase S26 family.
 
  
 0.603
Aasi_0039
Hypothetical protein.
  
  
 0.533
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.