STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_1318Hypothetical protein; PRINTS: PR00449, Ras GTPase;PR00326, GTP1/OBG; PFAM: PF01926, GTP-binding protein, HSR1-related; PIR: PIRSF006809, GTP-binding protein, HflX; TIGRFAMS: TIGR00231, Small GTP-binding protein. (325 aa)    
Predicted Functional Partners:
Aasi_1317
Hypothetical protein; PANTHER: PTHR23135:SF3, UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; SUPERFAMILY: SSF53623, Mur ligase, central;SSF53244, Mur ligase, C-terminal; PFAM: PF08245, Mur ligase, central;PF01225, Mur ligase, N-terminal;PF02875, Mur ligase, C-terminal; GENE3D: G3DSA:3.40.1190.10, Mur ligase, central;G3DSA:3.90.190.20, Mur ligase, C-terminal; TIGRFAMS: TIGR01143, UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase.
       0.572
rnr
Hypothetical protein; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
       0.406
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.