STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_1497Hypothetical protein; PFAM: PF01225, Mur ligase, N-terminal; GENE3D: G3DSA:3.40.50.720, NAD(P)-binding. (685 aa)    
Predicted Functional Partners:
Aasi_0098
Conserved hypothetical protein; PRINTS: PR01415, Ankyrin; PROFILE: PS50297, Ankyrin;PS50088, Ankyrin; PFAM: PF00023, Ankyrin; SUPERFAMILY: SSF48403, Ankyrin; GENE3D: G3DSA:1.25.40.20, Ankyrin; SMART: SM00248, Ankyrin.
  
     0.766
Aasi_1425
Hypothetical protein.
  
     0.750
Aasi_0817
Hypothetical protein.
 
     0.700
Aasi_1325
Hypothetical protein; PFAM: PF01609, Transposase, IS4-like.
 
     0.697
secE
Hypothetical protein; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.648
Aasi_0450
Hypothetical protein.
 
  
 0.617
Aasi_0768
Hypothetical protein; PROFILE: PS50293, Tetratricopeptide region; PFAM: PF08238, Sel1-like; GENE3D: G3DSA:1.25.40.10, Tetratricopeptide-like helical; SMART: SM00671, Sel1-like.
 
     0.609
Aasi_0160
Hypothetical protein; PFAM: PF00216, Histone-like bacterial DNA-binding protein; SUPERFAMILY: SSF47729, IHF-like DNA-binding; SMART: SM00411, Histone-like bacterial DNA-binding protein; GENE3D: G3DSA:4.10.520.10, Histone-like bacterial DNA-binding protein.
 
     0.606
Aasi_1197
Hypothetical protein.
  
     0.605
Aasi_0496
Hypothetical protein; PROSITE: PS00870, Chaperonin clpA/B; PROFILE: PS50151, UvrB/UvrC protein; PFAM: PF02151, UvrB/UvrC protein;PF00004, AAA ATPase, core;PF02861, Clp, N-terminal; SMART: SM00382, AAA+ ATPase, core.
  
     0.600
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.