STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_1502PROSITE: PS01199, Ribosomal protein L1; SUPERFAMILY: SSF56808, Ribosomal protein L1; PFAM: PF00687, Ribosomal protein L1; PIR: PIRSF002155, Ribosomal protein L1; PRODOM: PD001314, Ribosomal protein L1; GENE3D: G3DSA:3.30.190.20, Ribosomal protein L1, 2-layer alpha/beta-sandwich; TIGRFAMS: TIGR01169, Ribosomal protein L1, bacterial-type. (586 aa)    
Predicted Functional Partners:
Aasi_0205
Hypothetical protein; PROSITE: PS00622, Bacterial regulatory protein, LuxR.
 
 0.896
Aasi_0214
Hypothetical protein; PANTHER: PTHR11819, Na+/solute symporter; PROFILE: PS50283, Na+/solute symporter; PFAM: PF01966, Metal-dependent phosphohydrolase, HD region, subdomain;PF00474, Na+/solute symporter; SMART: SM00471, Metal-dependent phosphohydrolase, HD region.
 
 0.896
Aasi_0204
Hypothetical protein; SUPERFAMILY: SSF55048, Malonyl-CoA ACP transacylase, ACP-binding;SSF52151, Acyl transferase/acyl hydrolase/lysophospholipase; PFAM: PF00698, Acyl transferase; GENE3D: G3DSA:3.40.366.10, Acyl transferase region; TIGRFAMS: TIGR00128, Malonyl CoA-acyl carrier protein transacylase.
 
 0.858
Aasi_0213
Hypothetical protein; SUPERFAMILY: SSF49452, Carbohydrate-binding-like fold.
 
 0.858
Aasi_1439
Hypothetical protein; PANTHER: PTHR11895, Amidase signature enzyme; SUPERFAMILY: SSF75304, Amidase signature enzyme; PFAM: PF01425, Amidase signature enzyme; GENE3D: G3DSA:3.90.1300.10, Amidase signature enzyme; TIGRFAMS: TIGR00132, Glutamyl-tRNA(Gln) amidotransferase A subunit.
     
 0.592
Aasi_1160
Hypothetical protein; PROSITE: PS01150, NADH dehydrogenase (ubiquinone), 20 kDa subunit; PANTHER: PTHR11995:SF2, NADH dehydrogenase (ubiquinone), 20 kDa subunit;PTHR11995, [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB; PFAM: PF01058, NADH ubiquinone oxidoreductase, 20 kDa subunit; TIGRFAMS: TIGR01957, NADH dehydrogenase (ubiquinone), 20 kDa subunit.
     
 0.510
Aasi_0999
Hypothetical protein; PFAM: PF01609, Transposase, IS4-like.
     
 0.470
Aasi_1629
Hypothetical protein.
     
 0.470
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.