STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G9NEQ2_HYPAIUncharacterized protein. (615 aa)    
Predicted Functional Partners:
G9NZR9_HYPAI
Suf domain-containing protein.
   
 0.972
G9NJK7_HYPAI
Fip1 domain-containing protein.
    
 0.969
G9P923_HYPAI
DUF3453 domain-containing protein.
   
 0.964
G9NS87_HYPAI
Uncharacterized protein.
   
 0.961
G9NZG6_HYPAI
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.954
G9PBL9_HYPAI
CPSF_A domain-containing protein.
    
 0.954
G9P657_HYPAI
WD_REPEATS_REGION domain-containing protein.
    
 0.944
G9NQ33_HYPAI
CID domain-containing protein.
    
 0.942
G9NWF6_HYPAI
YTH domain-containing protein.
    
 0.936
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.917
Your Current Organism:
Trichoderma atroviride
NCBI taxonomy Id: 452589
Other names: T. atroviride IMI 206040, Trichoderma atroviride IMI 206040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.