G9NK73_HYPAI protein (Trichoderma atroviride)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G9NK73_HYPAI

AAA domain-containing protein. (343 aa)

Predicted Functional Partners:

G9NW97_HYPAI

0.864

G9NGP1_HYPAI

0.850

G9NR88_HYPAI

0.850

G9P4W3_HYPAI

0.850

G9PCD2_HYPAI

0.825

G9P7Y8_HYPAI

0.818

G9P3A0_HYPAI

0.808

G9NJD4_HYPAI

0.803

G9NZB3_HYPAI

0.803

G9P6U1_HYPAI

0.794

Your Current Organism:

Trichoderma atroviride

NCBI taxonomy Id: 452589
Other names: T. atroviride IMI 206040, Trichoderma atroviride IMI 206040

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G9NGP1_HYPAI	G9NJD4_HYPAI	G9NGP1	G9NJD4	UBX domain-containing protein.	Uncharacterized protein.	0.984
G9NGP1_HYPAI	G9NK73_HYPAI	G9NGP1	G9NK73	UBX domain-containing protein.	AAA domain-containing protein.	0.850
G9NGP1_HYPAI	G9NW97_HYPAI	G9NGP1	G9NW97	UBX domain-containing protein.	MPN domain-containing protein.	0.998
G9NGP1_HYPAI	G9NZB3_HYPAI	G9NGP1	G9NZB3	UBX domain-containing protein.	AZUL domain-containing protein.	0.970
G9NGP1_HYPAI	G9P3A0_HYPAI	G9NGP1	G9P3A0	UBX domain-containing protein.	Uncharacterized protein.	0.911
G9NGP1_HYPAI	G9P4W3_HYPAI	G9NGP1	G9P4W3	UBX domain-containing protein.	Uncharacterized protein.	0.951
G9NGP1_HYPAI	G9P6U1_HYPAI	G9NGP1	G9P6U1	UBX domain-containing protein.	TUG-UBL1 domain-containing protein.	0.942
G9NGP1_HYPAI	G9P7Y8_HYPAI	G9NGP1	G9P7Y8	UBX domain-containing protein.	Proteasome subunit beta.	0.983
G9NGP1_HYPAI	G9PCD2_HYPAI	G9NGP1	G9PCD2	UBX domain-containing protein.	Uncharacterized protein.	0.971
G9NJD4_HYPAI	G9NGP1_HYPAI	G9NJD4	G9NGP1	Uncharacterized protein.	UBX domain-containing protein.	0.984
G9NJD4_HYPAI	G9NK73_HYPAI	G9NJD4	G9NK73	Uncharacterized protein.	AAA domain-containing protein.	0.803
G9NJD4_HYPAI	G9NR88_HYPAI	G9NJD4	G9NR88	Uncharacterized protein.	PRKCSH domain-containing protein.	0.459
G9NJD4_HYPAI	G9NW97_HYPAI	G9NJD4	G9NW97	Uncharacterized protein.	MPN domain-containing protein.	0.999
G9NJD4_HYPAI	G9P3A0_HYPAI	G9NJD4	G9P3A0	Uncharacterized protein.	Uncharacterized protein.	0.913
G9NJD4_HYPAI	G9P4W3_HYPAI	G9NJD4	G9P4W3	Uncharacterized protein.	Uncharacterized protein.	0.937
G9NJD4_HYPAI	G9P6U1_HYPAI	G9NJD4	G9P6U1	Uncharacterized protein.	TUG-UBL1 domain-containing protein.	0.544
G9NJD4_HYPAI	G9P7Y8_HYPAI	G9NJD4	G9P7Y8	Uncharacterized protein.	Proteasome subunit beta.	0.675
G9NJD4_HYPAI	G9PCD2_HYPAI	G9NJD4	G9PCD2	Uncharacterized protein.	Uncharacterized protein.	0.565
G9NK73_HYPAI	G9NGP1_HYPAI	G9NK73	G9NGP1	AAA domain-containing protein.	UBX domain-containing protein.	0.850
G9NK73_HYPAI	G9NJD4_HYPAI	G9NK73	G9NJD4	AAA domain-containing protein.	Uncharacterized protein.	0.803