STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G9NN24_HYPAIWD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (305 aa)    
Predicted Functional Partners:
G9NJE5_HYPAI
WD_REPEATS_REGION domain-containing protein.
    
 0.999
G9NVJ7_HYPAI
Uncharacterized protein.
    
 0.999
G9P055_HYPAI
Peptidase S59 domain-containing protein.
    
 0.999
G9P1D2_HYPAI
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
0.999
G9P6K2_HYPAI
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
G9P6V1_HYPAI
RanBD1 domain-containing protein.
    
 0.999
G9NLZ7_HYPAI
Zinc_ribbon_16 domain-containing protein.
    
 0.998
G9NPF8_HYPAI
Uncharacterized protein.
    
 0.998
G9PBK8_HYPAI
WD_REPEATS_REGION domain-containing protein.
    
 0.998
G9NEX8_HYPAI
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.997
Your Current Organism:
Trichoderma atroviride
NCBI taxonomy Id: 452589
Other names: T. atroviride IMI 206040, Trichoderma atroviride IMI 206040
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