G9NTP7_HYPAI protein (Trichoderma atroviride)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G9NTP7_HYPAI

Uncharacterized protein. (236 aa)

Predicted Functional Partners:

G9NJI9_HYPAI

0.969

G9P5Q2_HYPAI

0.948

G9PAL2_HYPAI

0.948

G9PB79_HYPAI

0.946

G9NEP1_HYPAI

0.942

G9P8D9_HYPAI

0.942

G9NJB0_HYPAI

0.940

G9NXI7_HYPAI

0.940

G9NWJ2_HYPAI

0.939

G9NSD3_HYPAI

0.938

Your Current Organism:

Trichoderma atroviride

NCBI taxonomy Id: 452589
Other names: T. atroviride IMI 206040, Trichoderma atroviride IMI 206040

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G9NEP1_HYPAI	G9NJB0_HYPAI	G9NEP1	G9NJB0	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.965
G9NEP1_HYPAI	G9NJI9_HYPAI	G9NEP1	G9NJI9	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.952
G9NEP1_HYPAI	G9NSD3_HYPAI	G9NEP1	G9NSD3	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.955
G9NEP1_HYPAI	G9NTP7_HYPAI	G9NEP1	G9NTP7	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.942
G9NEP1_HYPAI	G9NWJ2_HYPAI	G9NEP1	G9NWJ2	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.936
G9NEP1_HYPAI	G9NXI7_HYPAI	G9NEP1	G9NXI7	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.979
G9NEP1_HYPAI	G9P5Q2_HYPAI	G9NEP1	G9P5Q2	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.982
G9NEP1_HYPAI	G9P8D9_HYPAI	G9NEP1	G9P8D9	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Sod_Fe_C domain-containing protein.	0.931
G9NEP1_HYPAI	G9PAL2_HYPAI	G9NEP1	G9PAL2	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.943
G9NEP1_HYPAI	G9PB79_HYPAI	G9NEP1	G9PB79	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.978
G9NJB0_HYPAI	G9NEP1_HYPAI	G9NJB0	G9NEP1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.965
G9NJB0_HYPAI	G9NJI9_HYPAI	G9NJB0	G9NJI9	Uncharacterized protein.	Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.	0.936
G9NJB0_HYPAI	G9NSD3_HYPAI	G9NJB0	G9NSD3	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.972
G9NJB0_HYPAI	G9NTP7_HYPAI	G9NJB0	G9NTP7	Uncharacterized protein.	Uncharacterized protein.	0.940
G9NJB0_HYPAI	G9NWJ2_HYPAI	G9NJB0	G9NWJ2	Uncharacterized protein.	Uncharacterized protein.	0.927
G9NJB0_HYPAI	G9NXI7_HYPAI	G9NJB0	G9NXI7	Uncharacterized protein.	Uncharacterized protein.	0.930
G9NJB0_HYPAI	G9P5Q2_HYPAI	G9NJB0	G9P5Q2	Uncharacterized protein.	Uncharacterized protein.	0.936
G9NJB0_HYPAI	G9P8D9_HYPAI	G9NJB0	G9P8D9	Uncharacterized protein.	Sod_Fe_C domain-containing protein.	0.930
G9NJB0_HYPAI	G9PAL2_HYPAI	G9NJB0	G9PAL2	Uncharacterized protein.	Uncharacterized protein.	0.932
G9NJB0_HYPAI	G9PB79_HYPAI	G9NJB0	G9PB79	Uncharacterized protein.	Uncharacterized protein.	0.977