STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G9NW52_HYPAIUncharacterized protein. (366 aa)    
Predicted Functional Partners:
G9NV06_HYPAI
Uncharacterized protein.
   
  
 0.635
G9NHI1_HYPAI
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.576
G9NJP3_HYPAI
Uncharacterized protein.
  
    0.565
G9NHR4_HYPAI
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.556
G9NWQ3_HYPAI
PseudoU_synth_1 domain-containing protein.
  
 
 0.550
G9NUQ1_HYPAI
Uncharacterized protein.
   
    0.541
TSR3
Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family.
   
  
 0.526
G9P0R9_HYPAI
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.520
G9P947_HYPAI
Uncharacterized protein.
   
  
 0.506
G9P6Z9_HYPAI
PseudoU_synth_1 domain-containing protein.
  
 
 0.485
Your Current Organism:
Trichoderma atroviride
NCBI taxonomy Id: 452589
Other names: T. atroviride IMI 206040, Trichoderma atroviride IMI 206040
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