STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G9PBF7_HYPAIGeranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (423 aa)    
Predicted Functional Partners:
G9NR02_HYPAI
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.969
G9P813_HYPAI
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
    
 0.969
G9P0P4_HYPAI
Nudix hydrolase domain-containing protein.
  
 
 0.960
G9NX56_HYPAI
Tryptophan synthase.
    
 0.953
G9NY27_HYPAI
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.949
G9P981_HYPAI
Alpha subunit of hypothetical CAAX farnesyltransferase.
     
 0.945
G9NS82_HYPAI
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.939
G9NXQ2_HYPAI
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
     
0.937
G9PBS6_HYPAI
Squalene synthase.
  
 0.930
G9NW50_HYPAI
Di-trans,poly-cis-decaprenylcistransferase.
  
 
 0.925
Your Current Organism:
Trichoderma atroviride
NCBI taxonomy Id: 452589
Other names: T. atroviride IMI 206040, Trichoderma atroviride IMI 206040
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