STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G9PBM3_HYPAIUncharacterized protein. (287 aa)    
Predicted Functional Partners:
G9NWC1_HYPAI
CP-type G domain-containing protein.
   
 0.953
G9P9J3_HYPAI
BRCT domain-containing protein.
   
  0.950
G9NFF9_HYPAI
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.935
G9NUG4_HYPAI
Sas10 domain-containing protein.
   
  0.922
G9P7V4_HYPAI
Uncharacterized protein.
   
 0.920
G9NQ28_HYPAI
RRM domain-containing protein.
   
 
 0.919
G9NV14_HYPAI
Uncharacterized protein.
   
 0.909
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 0.902
G9NK41_HYPAI
Brix domain-containing protein.
   
   0.898
G9NRA4_HYPAI
WD_REPEATS_REGION domain-containing protein.
   
 0.898
Your Current Organism:
Trichoderma atroviride
NCBI taxonomy Id: 452589
Other names: T. atroviride IMI 206040, Trichoderma atroviride IMI 206040
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