STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_0067PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sru:SRU_2855 two-component system response regulator protein. (268 aa)    
Predicted Functional Partners:
Oter_0068
Signal transduction histidine kinase, LytS; PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: sus:Acid_2196 signal transduction histidine kinase, LytS.
 
 0.906
Oter_0705
Signal transduction histidine kinase, LytS; PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: sus:Acid_2196 signal transduction histidine kinase, LytS.
 
 0.836
Oter_0978
Signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; KEGG: sru:SRU_2725 two-component system sensor protein, putative.
 
 0.836
Oter_1113
Signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; KEGG: azc:AZC_1300 putative two-component sensor histidine kinase.
 
 0.836
Oter_1526
Signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; KEGG: sru:SRU_0415 putative transmembrane sensor histidine kinase transcription regulator protein.
 
 0.836
Oter_2330
Signal transduction histidine kinase, LytS; PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: sus:Acid_2196 signal transduction histidine kinase, LytS.
 
 0.836
Oter_3912
Signal transduction histidine kinase, LytS; PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; KEGG: sus:Acid_2196 signal transduction histidine kinase, LytS.
 
 0.836
Oter_0065
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aba:Acid345_3010 alcohol dehydrogenase GroES-like.
  
    0.498
Oter_0066
PFAM: cyclase/dehydrase; KEGG: ava:Ava_4497 streptomyces cyclase/dehydrase.
       0.495
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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