STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_0270PFAM: glycoside hydrolase family 3 domain protein; KEGG: ypi:YpsIP31758_2994 glycosyl hydrolase, family 3. (685 aa)    
Predicted Functional Partners:
Oter_3217
KEGG: ccr:CC_0796 alpha-glucosidase, putative.
 
  
 0.916
Oter_0169
KEGG: spl:Spea_1628 putative alpha-glucosidase.
 
  
 0.913
Oter_1745
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: scl:sce6460 hypothetical protein.
    
 0.903
Oter_0817
PFAM: glycoside hydrolase family 3 domain protein; KEGG: sal:Sala_1014 glycoside hydrolase, family 3-like protein; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.745
Oter_3351
PFAM: glycoside hydrolase family 3 domain protein; KEGG: bfs:BF0758 putative glycosyl hydrolase.
  
  
 
0.745
Oter_1375
PFAM: glycoside hydrolase family 3 domain protein; KEGG: bvu:BVU_0131 glycoside hydrolase family 3, candidate beta-glycosidase.
  
  
 
0.742
Oter_3219
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: cbe:Cbei_4974 glycoside hydrolase, family 3 domain protein.
  
  
 
0.738
Oter_2190
Beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; KEGG: aor:AO090005000337 beta-glucosidase-related glycosidases Pfam: Glyco_hydro_3 Glyco_hydro_3_C.
  
  
 
0.727
Oter_3317
PFAM: glycoside hydrolase family 5; KEGG: cth:Cthe_2807 glycoside hydrolase, family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.701
Oter_3623
PFAM: glycoside hydrolase family 1; KEGG: bad:BAD_0156 hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
    
 0.667
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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