STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_0333PFAM: inositol monophosphatase; KEGG: ppd:Ppro_0018 inositol monophosphatase. (267 aa)    
Predicted Functional Partners:
Oter_3177
PFAM: inositol monophosphatase; KEGG: cya:CYA_2675 inositol monophosphatase family protein.
  
  
 
0.925
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
    0.899
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
   
   0.613
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.577
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.577
Oter_0332
Hypothetical protein.
       0.544
Oter_4031
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ppd:Ppro_3242 sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.476
Oter_0334
Hypothetical protein.
       0.452
Oter_3638
NusG antitermination factor; PFAM: NGN domain protein; KEGG: sru:SRU_2746 hypothetical protein.
  
 
 0.434
Oter_4301
PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_3711 GCN5-related N-acetyltransferase.
 
      0.427
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.