STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_0422Hypothetical protein. (54 aa)    
Predicted Functional Partners:
Oter_0417
KEGG: mgm:Mmc1_0058 hypothetical protein.
       0.773
Oter_0418
KEGG: ace:Acel_0845 hypothetical protein.
       0.773
Oter_0419
Flagellar protein export ATPase FliI; KEGG: pth:PTH_2085 flagellar biosynthesis/type III secretory pathway ATPase; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase.
       0.773
Oter_0420
Hypothetical protein.
       0.773
Oter_0421
Hypothetical protein; KEGG: afw:Anae109_2217 flagellar assembly protein FliH, putative.
       0.773
Oter_0423
PFAM: flagellar motor switch protein FliG; KEGG: tma:TM0220 flagellar motor switch protein G.
       0.757
Oter_0424
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
       0.712
Oter_0415
PFAM: flagellar hook capping protein; KEGG: bay:RBAM_016110 YlxG.
       0.594
Oter_0416
Hypothetical protein; KEGG: lma:LmjF35.0520 proteophosphoglycan ppg4.
       0.594
fliE
TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: pca:Pcar_1193 flagellar hook-basal body complex protein FliE.
       0.578
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.