STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_0574PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: bbr:BB3328 probable cytochrome c oxidase subunit. (615 aa)    
Predicted Functional Partners:
Oter_3544
PFAM: Cytochrome b/b6 domain; KEGG: sus:Acid_7586 cytochrome b/b6, N-terminal domain.
  
 
 0.977
Oter_2871
PFAM: cytochrome c oxidase subunit I; KEGG: fps:FP0920 cytochrome c oxidase family protein.
 
 0.953
Oter_3928
KEGG: pol:Bpro_1267 cytochrome c oxidase, subunit I.
 
 0.953
Oter_0573
Hypothetical protein; KEGG: rme:Rmet_4322 cytochrome c oxidase, subunit I.
  
 
 0.916
Oter_4079
KEGG: mxa:MXAN_5539 cytochrome c oxidase, cbb3-type, subunit III.
 
 
 0.890
Oter_4077
KEGG: mxa:MXAN_5541 cytochrome c oxidase, cbb3-type, subunit I/II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome C oxidase mono-heme subunit/FixO; Belongs to the heme-copper respiratory oxidase family.
 
 
0.860
Oter_4080
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: mxa:MXAN_5538 cytochrome c oxidase accessory protein FixG.
 
  
 0.848
Oter_0601
KEGG: tbd:Tbd_0635 coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.805
Oter_0569
PFAM: YceI family protein; KEGG: bxe:Bxe_A3996 hypothetical protein; Belongs to the UPF0312 family.
       0.773
Oter_0570
PFAM: Polyprenyl synthetase; KEGG: esa:ESA_00347 hypothetical protein; Belongs to the FPP/GGPP synthase family.
       0.773
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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