STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_0790PFAM: glycosyl transferase group 1; KEGG: hch:HCH_03962 glycosyltransferase. (421 aa)    
Predicted Functional Partners:
Oter_1332
KEGG: abo:ABO_1607 hypothetical protein.
     
  0.900
Oter_2539
PFAM: Monogalactosyldiacylglycerol synthase; KEGG: bur:Bcep18194_B0550 UDP-N-acetylglucosamine/LPS N-acetylglucosamine transferase-like.
    
 0.900
Oter_4013
KEGG: syg:sync_0157 hypothetical protein.
    
 0.900
Oter_0789
KEGG: hch:HCH_03963 hypothetical protein.
 
     0.886
Oter_0791
Endonuclease/exonuclease/phosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; Endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4328 endonuclease/exonuclease/phosphatase.
 
   
 0.799
Oter_4072
PFAM: SNARE associated Golgi protein; KEGG: dol:Dole_2781 SNARE associated Golgi protein.
  
    0.582
Oter_3443
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: cpy:Cphy_3542 undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.421
Oter_3763
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mxa:MXAN_2922 bacterial sugar transferase.
  
  
 0.421
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.