STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_0807Hypothetical protein; KEGG: pna:Pnap_1282 cytochrome c, class I. (150 aa)    
Predicted Functional Partners:
Oter_3541
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 
 0.980
Oter_4077
KEGG: mxa:MXAN_5541 cytochrome c oxidase, cbb3-type, subunit I/II; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome C oxidase mono-heme subunit/FixO; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.967
Oter_2870
PFAM: cytochrome c class I; cytochrome C oxidase mono-heme subunit/FixO; KEGG: fps:FP0919 cytochrome c oxidase family protein.
  
 
 0.960
Oter_3540
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.945
Oter_2072
TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: sth:STH2096 cytochrome c oxidase subunit II.
  
 
 0.942
Oter_3543
PFAM: Rieske [2Fe-2S] domain protein; KEGG: sus:Acid_7585 Rieske (2Fe-2S) domain protein.
  
 
 0.845
Oter_3544
PFAM: Cytochrome b/b6 domain; KEGG: sus:Acid_7586 cytochrome b/b6, N-terminal domain.
  
 
 0.801
Oter_0806
PFAM: globin; KEGG: azc:AZC_0683 putative hemoprotein.
     
 0.619
Oter_3935
KEGG: scl:sce7584 cytochrome c family protein.
   
 
 0.608
Oter_3933
PFAM: Polysulphide reductase NrfD; KEGG: scl:sce7586 hypothetical protein.
   
 
 0.588
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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