STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_1005PFAM: Beta-N-acetylhexosaminidase-like; Glycoside hydrolase, family 20, catalytic core; KEGG: sus:Acid_3086 beta-N-acetylhexosaminidase. (688 aa)    
Predicted Functional Partners:
Oter_3591
Chitinase; KEGG: sru:SRU_2812 chitinase A1 precursor; PFAM: glycoside hydrolase family 18; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.937
Oter_1744
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; KEGG: cpy:Cphy_1929 glycosyltransferase 36.
     
  0.900
Oter_2310
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; KEGG: cpy:Cphy_1929 glycosyltransferase 36.
     
  0.900
Oter_2312
Glycosyltransferase 36; PFAM: putative carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: cpy:Cphy_1929 glycosyltransferase 36.
     
  0.900
Oter_1006
TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: LmbE family protein; glucosamine/galactosamine-6-phosphate isomerase; KEGG: chu:CHU_1660 glucosamine-6-phosphate deaminase-like protein.
 
   
 0.834
Oter_1004
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ftw:FTW_1129 sugar transporter, MFS family.
 
     0.677
Oter_4085
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 sugar binding; KEGG: sco:SCO6232 putative beta-mannosidase.
 
 
 0.634
Oter_2314
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: pat:Patl_0128 glycoside hydrolase family 2, sugar binding.
 
 
 0.584
Oter_1003
KEGG: pdi:BDI_1342 hypothetical protein.
 
     0.539
Oter_2925
Beta-galactosidase; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 35; KEGG: bth:BT_0290 beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family.
 
  
 0.456
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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