STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_1139KEGG: afw:Anae109_3215 hypothetical protein. (432 aa)    
Predicted Functional Partners:
Oter_3708
KEGG: ppd:Ppro_0040 hypothetical protein.
 
     0.777
Oter_4164
KEGG: scl:sce5972 hypothetical protein.
  
     0.729
Oter_4391
Glucose/sorbosone dehydrogenase-like protein; KEGG: ckl:CKL_1484 hypothetical protein.
  
     0.679
Oter_4347
KEGG: noc:Noc_1591 protein of unknown function DUF1469.
  
     0.668
Oter_0449
Conserved hypothetical protein; KEGG: mta:Moth_0762 protein of unknown function DUF115.
  
  
 0.661
Oter_4348
KEGG: mlo:mlr9697 hypothetical protein.
  
     0.628
Oter_4147
KEGG: mes:Meso_0331 hypothetical protein.
  
     0.607
Oter_3703
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: noc:Noc_0472 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.572
Oter_1138
KEGG: afw:Anae109_3214 hypothetical protein.
 
    
0.567
Oter_0134
KEGG: rba:RB9146 hypothetical protein.
  
     0.482
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.