Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Oter_1238 | Oter_1239 | Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sus:Acid_1604 integral membrane sensor signal transduction histidine kinase. | PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sus:Acid_1603 two component transcriptional regulator, LuxR family. | 0.956 |
Oter_1238 | Oter_1240 | Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sus:Acid_1604 integral membrane sensor signal transduction histidine kinase. | Membrane protein; KEGG: ilo:IL2353 predicted membrane protein. | 0.428 |
Oter_1239 | Oter_1238 | PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sus:Acid_1603 two component transcriptional regulator, LuxR family. | Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sus:Acid_1604 integral membrane sensor signal transduction histidine kinase. | 0.956 |
Oter_1239 | Oter_1240 | PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sus:Acid_1603 two component transcriptional regulator, LuxR family. | Membrane protein; KEGG: ilo:IL2353 predicted membrane protein. | 0.428 |
Oter_1240 | Oter_1238 | Membrane protein; KEGG: ilo:IL2353 predicted membrane protein. | Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sus:Acid_1604 integral membrane sensor signal transduction histidine kinase. | 0.428 |
Oter_1240 | Oter_1239 | Membrane protein; KEGG: ilo:IL2353 predicted membrane protein. | PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sus:Acid_1603 two component transcriptional regulator, LuxR family. | 0.428 |
Oter_1240 | Oter_1241 | Membrane protein; KEGG: ilo:IL2353 predicted membrane protein. | PFAM: protein of unknown function DUF883 ElaB; KEGG: mpt:Mpe_A0015 putative transmembrane protein. | 0.528 |
Oter_1241 | Oter_1240 | PFAM: protein of unknown function DUF883 ElaB; KEGG: mpt:Mpe_A0015 putative transmembrane protein. | Membrane protein; KEGG: ilo:IL2353 predicted membrane protein. | 0.528 |