STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_1552TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: dps:DP0371 cation efflux system protein (CzcA); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1109 aa)    
Predicted Functional Partners:
Oter_1553
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pca:Pcar_1715 putative cation efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.943
Oter_4432
TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pca:Pcar_1714 putative inner membrane component for iron transport; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
 
0.900
Oter_4431
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pca:Pcar_1715 putative cation efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.866
Oter_1554
PFAM: outer membrane efflux protein; KEGG: ajs:Ajs_1481 outer membrane efflux protein.
 
  
 0.839
Oter_4430
PFAM: outer membrane efflux protein; KEGG: nmu:Nmul_A1408 outer membrane efflux protein.
 
  
 0.650
Oter_1555
Hypothetical protein.
       0.495
Oter_4441
PFAM: outer membrane efflux protein; KEGG: rme:Rmet_4120 outer membrane efflux protein.
 
  
 0.473
Oter_0508
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: pla:Plav_1536 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.428
Oter_1455
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: tcx:Tcr_0454 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.404
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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