STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_1569PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sru:SRU_2795 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (248 aa)    
Predicted Functional Partners:
Oter_1967
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: sma:SAV3642 non-ribosomal peptide synthetase.
 
  
 0.917
Oter_1971
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: scl:sce8257 non-ribosomal peptide synthetase.
 
  
 0.915
Oter_1970
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: bpl:BURPS1106A_A2212 non-ribosomal peptide synthase.
 
    
 0.900
Oter_1973
MCP methyltransferase, CheR-type; TIGRFAM: amino acid adenylation domain protein; PFAM: MCP methyltransferase CheR-type; AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KEGG: ckl:CKL_2354 predicted nonribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.848
Oter_1568
KEGG: fps:FP1030 hypothetical protein.
       0.773
Oter_2880
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pac:PPA0372 3-ketoacyl-(acyl-carrier-protein) reductase.
  
 
 0.681
folE2
Protein of unknown function DUF198; Converts GTP to 7,8-dihydroneopterin triphosphate.
       0.609
Oter_1566
PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: sru:SRU_2793 putative 6-pyruvoyl tetrahydropterin synthase.
 
     0.603
Oter_1961
Beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Male sterility domain; KR domain protein; Beta-ketoacyl synthase; KEGG: ava:Ava_4108 beta-ketoacyl synthase.
  
 
 0.506
Oter_1969
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Methyltransferase type 11; Methyltransferase type 12; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: ava:Ava_1612 beta-ketoacyl synthase.
  
 
 0.437
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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